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Table 3 SNVs of multidrug efflux pump transporter genes

From: Application of next-generation sequencing to characterize novel mutations in clarithromycin-susceptible Helicobacter pylori strains with A2143G of 23S rRNA gene

Gene Strain
S1 S2 S3 S4 S5 S6 S7 S8 S9 S10 S11 S12
HP0605 21 18 23 24 23 16 20 27 15 17 29 27
HP0606 5 5 6 1 4 7 5 6 8 5 2 8
HP0607 38 34 32 32 33 30 22 31 32 32 27 36
HP0969 26 23 25 25 24 25 26 23 26 26 24 23
HP0970 7 9 11 7 7 9 8 8 8 9 9 7
HP0971 11 15 12 11 13 12 14 11 8 9 10 11
HP1327 22 22 21 24 22 22 21 22 23 25 23 22
HP1328 15 12 15 14 12 14 13 14 15 14 12 14
HP1329 28 29 36 30 28 25 33 30 26 24 32 30
HP1487 22 21 15 20 21 18 16 18 18 19 17 16
HP1488 7 4 3 6 4 4 5 6 5 4 4 5
HP1489 25 28 23 22 23 25 19 20 24 29 25 19
HP0600 50 3 1 52 48 23 20 46 5 31 47 44
HP0613 9 7 6 9 7 15 3 9 10 15 8 5
HP0759 10 11 10 10 11 11 8 10 11 9 8 11
HP1082 10 13 12 10 11 12 17 11 15 11 12 16
HP1181 10 9 11 9 10 7 11 12 12 9 9 12
HP1184 14 19 14 22 15 14 12 18 13 14 17 15
HP1206 13 16 14 13 14 13 27 16 16 18 18 12
HP1220 3 3 4 3 2 1 4 3 1 1 2 1
HP1321 26 30 29 22 24 29 32 30 24 24 30 28
HP1486 21 18 18 18 18 17 16 17 18 15 17 12
Total 393 349 341 384 374 349 352 388 333 360 382 374
  1. S2 and S3 (italic values) indicates the phenotype-susceptible strains with mutant in A2143G of 23S rRNA gene